Shotgun Metagenomics of artificial consortia with PE as carbon source - SRA

SRX25521201: Shotgun Metagenomics of artificial consortia with PE as carbon source
1 ILLUMINA (Illumina NovaSeq 6000) run: 59.1M spots, 17.7G bases, 5.5Gb downloads

Design: Amplify the whole metagenome

Submitted by: Darwin Bioprospecting Excellence

Study: Metagenomic and metatranscriptomic raw reads from different artificial consortia in the context of a study on the degradation of PP and PE polymers. Raw sequence reads

PRJNA1138529 • SRP523232 • All experiments • All runs

show Abstracthide Abstract

This submission contains metagenomic and metatranscriptomic raw reads from 4 artificial consortia (3 biological replicates each) analyzed to identify potential enzymes for the degradation of polypropylene (PP) and polyethylene (PE). This work was performed as part of the ENZYCLE project, which aims to valorize non-recycled plastic fractions through enzymatic processes and address the issue of microplastics.

Sample: Artificial consortia AC7 in M9 minimal medium growth with PE as carbon source (replicate 1)

SAMN42900643 • SRS22175132 • All experiments • All runs

Organism: mixed culture metagenome

Library:

Name: enzca7

Instrument: Illumina NovaSeq 6000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 59.1M spots, 17.7G bases, 5.5Gb

Run	# of Spots	# of Bases	Size	Published
SRR30046718	59,148,812	17.7G	5.5Gb	2024-07-31

ID:: 34505929

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity